WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A1A.8a.1 Sequence Name  Y39A1A.8a.1
Length (nt)  949   Chromosome Location  III: 10625932-10629143
Chromosome . Primary Identifier  III Chromosome Location . Start  10625932
Chromosome Location . End  10629143 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A1A.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012647 swt-4 Y39A1A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A1A.8a Y39A1A.8a 678   III: 10626149-10626256

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39A1A.8a.1 10625932 10629143 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103775   325   III: 10625932-10626256 Caenorhabditis elegans
Exon103781   114   III: 10626548-10626661 Caenorhabditis elegans
Exon103784   168   III: 10626851-10627018 Caenorhabditis elegans
Exon103787   134   III: 10627541-10627674 Caenorhabditis elegans
Exon103790   87   III: 10627731-10627817 Caenorhabditis elegans
Exon103793   78   III: 10628360-10628437 Caenorhabditis elegans
Exon103796   43   III: 10629101-10629143 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39A1A.8a.1 10625932 10629143 -1

1 Sequence

Length
949

1 Sequence Ontology Term

Identifier Name Description
transcript