WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A1A.23a.1 Sequence Name  Y39A1A.23a.1
Length (nt)  1736   Chromosome Location  III: 10621551-10626398
Chromosome . Primary Identifier  III Chromosome Location . Start  10621551
Chromosome Location . End  10626398 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A1A.23a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001997 hpr-9 Y39A1A.23 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A1A.23a Y39A1A.23a 1566   III: 10621557-10621668

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39A1A.23a.1 10621551 10626398 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103752   118   III: 10621551-10621668 Caenorhabditis elegans
Exon103754   71   III: 10621718-10621788 Caenorhabditis elegans
Exon103756   126   III: 10621842-10621967 Caenorhabditis elegans
Exon103758   115   III: 10622016-10622130 Caenorhabditis elegans
Exon103760   106   III: 10622179-10622284 Caenorhabditis elegans
Exon103762   406   III: 10623218-10623623 Caenorhabditis elegans
Exon103764   56   III: 10624420-10624475 Caenorhabditis elegans
Exon103766   183   III: 10624529-10624711 Caenorhabditis elegans
Exon103770   72   III: 10624872-10624943 Caenorhabditis elegans
Exon103772   208   III: 10625379-10625586 Caenorhabditis elegans
Exon103776   100   III: 10626048-10626147 Caenorhabditis elegans
Exon103780   175   III: 10626224-10626398 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39A1A.23a.1 10621551 10626398 1

1 Sequence

Length
1736

1 Sequence Ontology Term

Identifier Name Description
transcript