WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A1A.2a.1 Sequence Name  Y39A1A.2a.1
Length (nt)  678   Chromosome Location  III: 10601894-10603566
Chromosome . Primary Identifier  III Chromosome Location . Start  10601894
Chromosome Location . End  10603566 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A1A.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012642 Y39A1A.2 Y39A1A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A1A.2a Y39A1A.2a 615   III: 10601940-10602047

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39A1A.2a.1 10601894 10603566 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103705   154   III: 10601894-10602047 Caenorhabditis elegans
Exon103709   229   III: 10602706-10602934 Caenorhabditis elegans
Exon103711   116   III: 10603070-10603185 Caenorhabditis elegans
Exon103716   111   III: 10603309-10603419 Caenorhabditis elegans
Exon103720   68   III: 10603499-10603566 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39A1A.2a.1 10601894 10603566 -1

1 Sequence

Length
678

1 Sequence Ontology Term

Identifier Name Description
transcript