WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T16H12.5a.1 Sequence Name  T16H12.5a.1
Length (nt)  1728   Chromosome Location  III: 10090862-10098081
Chromosome . Primary Identifier  III Chromosome Location . Start  10090862
Chromosome Location . End  10098081 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T16H12.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011815 spop-1 T16H12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T16H12.5a T16H12.5a 1356   III: 10091204-10091353

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T16H12.5a.1 10090862 10098081 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon102526   492   III: 10090862-10091353 Caenorhabditis elegans
Exon102528   135   III: 10091405-10091539 Caenorhabditis elegans
Exon102530   399   III: 10091733-10092131 Caenorhabditis elegans
Exon102532   402   III: 10092422-10092823 Caenorhabditis elegans
Exon102534   114   III: 10092882-10092995 Caenorhabditis elegans
Exon102536   86   III: 10093049-10093134 Caenorhabditis elegans
Exon102538   100   III: 10097982-10098081 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T16H12.5a.1 10090862 10098081 -1

1 Sequence

Length
1728

1 Sequence Ontology Term

Identifier Name Description
transcript