WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F40F12.5a.1 Sequence Name  F40F12.5a.1
Length (nt)  3830   Chromosome Location  III: 9898604-9910658
Chromosome . Primary Identifier  III Chromosome Location . Start  9898604
Chromosome Location . End  9910658 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40F12.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009594 cyld-1 F40F12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F40F12.5a F40F12.5a 3435   III: 9898998-9899147

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F40F12.5a.1 9898604 9910658 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon102017   544   III: 9898604-9899147 Caenorhabditis elegans
Exon102020   661   III: 9899310-9899970 Caenorhabditis elegans
Exon102023   249   III: 9900043-9900291 Caenorhabditis elegans
Exon102026   481   III: 9900339-9900819 Caenorhabditis elegans
Exon102029   409   III: 9900893-9901301 Caenorhabditis elegans
Exon102032   136   III: 9901590-9901725 Caenorhabditis elegans
Exon102035   149   III: 9901776-9901924 Caenorhabditis elegans
Exon102038   160   III: 9902567-9902726 Caenorhabditis elegans
Exon102041   103   III: 9902771-9902873 Caenorhabditis elegans
Exon102045   85   III: 9903819-9903903 Caenorhabditis elegans
Exon102047   105   III: 9906948-9907052 Caenorhabditis elegans
Exon102049   109   III: 9909088-9909196 Caenorhabditis elegans
Exon102050   77   III: 9909240-9909316 Caenorhabditis elegans
Exon102051   126   III: 9909597-9909722 Caenorhabditis elegans
Exon102052   240   III: 9910116-9910355 Caenorhabditis elegans
Exon102053   158   III: 9910411-9910568 Caenorhabditis elegans
Exon102054   38   III: 9910621-9910658 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F40F12.5a.1 9898604 9910658 -1

1 Sequence

Length
3830

1 Sequence Ontology Term

Identifier Name Description
transcript