WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11H3.1a.1 Sequence Name  K11H3.1a.1
Length (nt)  1389   Chromosome Location  III: 9854080-9859183
Chromosome . Primary Identifier  III Chromosome Location . Start  9854080
Chromosome Location . End  9859183 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11H3.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010778 gpdh-2 K11H3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11H3.1a K11H3.1a 1116   III: 9854304-9854400

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11H3.1a.1 9854080 9859183 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon101840   321   III: 9854080-9854400 Caenorhabditis elegans
Exon101843   137   III: 9854932-9855068 Caenorhabditis elegans
Exon101847   459   III: 9855125-9855583 Caenorhabditis elegans
Exon101853   141   III: 9856091-9856231 Caenorhabditis elegans
Exon101856   181   III: 9856641-9856821 Caenorhabditis elegans
Exon101862   89   III: 9856988-9857076 Caenorhabditis elegans
Exon101865   61   III: 9859123-9859183 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11H3.1a.1 9854080 9859183 -1

1 Sequence

Length
1389

1 Sequence Ontology Term

Identifier Name Description
transcript