WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05G5.9a.1 Sequence Name  T05G5.9a.1
Length (nt)  2162   Chromosome Location  III: 9757616-9762143
Chromosome . Primary Identifier  III Chromosome Location . Start  9757616
Chromosome Location . End  9762143 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05G5.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011503 gcc-2 T05G5.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05G5.9a T05G5.9a 1983   III: 9757794-9757864

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T05G5.9a.1 9757616 9762143 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon101547   249   III: 9757616-9757864 Caenorhabditis elegans
Exon101549   217   III: 9758349-9758565 Caenorhabditis elegans
Exon101551   137   III: 9758609-9758745 Caenorhabditis elegans
Exon101553   52   III: 9758813-9758864 Caenorhabditis elegans
Exon101560   672   III: 9760385-9761056 Caenorhabditis elegans
Exon101562   112   III: 9761098-9761209 Caenorhabditis elegans
Exon101564   452   III: 9761257-9761708 Caenorhabditis elegans
Exon101566   99   III: 9761755-9761853 Caenorhabditis elegans
Exon101568   102   III: 9761913-9762014 Caenorhabditis elegans
Exon101570   70   III: 9762074-9762143 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T05G5.9a.1 9757616 9762143 -1

1 Sequence

Length
2162

1 Sequence Ontology Term

Identifier Name Description
transcript