WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05G5.8a.1 Sequence Name  T05G5.8a.1
Length (nt)  2550   Chromosome Location  III: 9753675-9757514
Chromosome . Primary Identifier  III Chromosome Location . Start  9753675
Chromosome Location . End  9757514 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05G5.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011502 vps-53 T05G5.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05G5.8a T05G5.8a 2397   III: 9753828-9754196

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T05G5.8a.1 9753675 9757514 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon101537   522   III: 9753675-9754196 Caenorhabditis elegans
Exon101539   352   III: 9754404-9754755 Caenorhabditis elegans
Exon101541   369   III: 9755038-9755406 Caenorhabditis elegans
Exon101544   665   III: 9755568-9756232 Caenorhabditis elegans
Exon101545   303   III: 9756827-9757129 Caenorhabditis elegans
Exon101546   339   III: 9757176-9757514 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T05G5.8a.1 9753675 9757514 -1

1 Sequence

Length
2550

1 Sequence Ontology Term

Identifier Name Description
transcript