WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58A4.4a.1 Sequence Name  F58A4.4a.1
Length (nt)  1291   Chromosome Location  III: 9612291-9614281
Chromosome . Primary Identifier  III Chromosome Location . Start  9612291
Chromosome Location . End  9614281 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A4.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004180 pri-1 F58A4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A4.4a F58A4.4a 1233   III: 9612347-9612500

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F58A4.4a.1 9612291 9614281 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon101220   210   III: 9612291-9612500 Caenorhabditis elegans
Exon101221   118   III: 9612548-9612665 Caenorhabditis elegans
Exon101224   85   III: 9613045-9613129 Caenorhabditis elegans
Exon101225   306   III: 9613182-9613487 Caenorhabditis elegans
Exon101226   211   III: 9613536-9613746 Caenorhabditis elegans
Exon101227   259   III: 9613875-9614133 Caenorhabditis elegans
Exon101228   102   III: 9614180-9614281 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F58A4.4a.1 9612291 9614281 -1

1 Sequence

Length
1291

1 Sequence Ontology Term

Identifier Name Description
transcript