WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C48B4.1.1 Sequence Name  C48B4.1.1
Length (nt)  2090   Chromosome Location  III: 9586612-9592192
Chromosome . Primary Identifier  III Chromosome Location . Start  9586612
Chromosome Location . End  9592192 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48B4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008167 acox-1.5 C48B4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48B4.1 C48B4.1 1980   III: 9586713-9586838

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C48B4.1.1 9586612 9592192 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon101154   227   III: 9586612-9586838 Caenorhabditis elegans
Exon101155   282   III: 9586890-9587171 Caenorhabditis elegans
Exon101156   143   III: 9587623-9587765 Caenorhabditis elegans
Exon101157   159   III: 9588109-9588267 Caenorhabditis elegans
Exon101158   710   III: 9588705-9589414 Caenorhabditis elegans
Exon101159   94   III: 9589721-9589814 Caenorhabditis elegans
Exon101160   70   III: 9590548-9590617 Caenorhabditis elegans
Exon101161   165   III: 9590727-9590891 Caenorhabditis elegans
Exon101162   166   III: 9591347-9591512 Caenorhabditis elegans
Exon101163   74   III: 9592119-9592192 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C48B4.1.1 9586612 9592192 -1

1 Sequence

Length
2090

1 Sequence Ontology Term

Identifier Name Description
transcript