WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C48B4.4d.1 Sequence Name  C48B4.4d.1
Length (nt)  5277   Chromosome Location  III: 9570688-9579873
Chromosome . Primary Identifier  III Chromosome Location . Start  9570688
Chromosome Location . End  9579873 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48B4.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000421 ced-7 C48B4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48B4.4d C48B4.4d 5277   III: 9570688-9570882

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C48B4.4d.1 9570688 9579873 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon101080   195   III: 9570688-9570882 Caenorhabditis elegans
Exon101085   861   III: 9571423-9572283 Caenorhabditis elegans
Exon101090   255   III: 9572331-9572585 Caenorhabditis elegans
Exon101095   199   III: 9572639-9572837 Caenorhabditis elegans
Exon101100   260   III: 9572885-9573144 Caenorhabditis elegans
Exon101105   189   III: 9573224-9573412 Caenorhabditis elegans
Exon101110   185   III: 9573465-9573649 Caenorhabditis elegans
Exon101115   458   III: 9573696-9574153 Caenorhabditis elegans
Exon101119   986   III: 9575861-9576846 Caenorhabditis elegans
Exon101125   60   III: 9576974-9577033 Caenorhabditis elegans
Exon101130   970   III: 9577137-9578106 Caenorhabditis elegans
Exon101135   177   III: 9578445-9578621 Caenorhabditis elegans
Exon101140   146   III: 9578674-9578819 Caenorhabditis elegans
Exon101145   197   III: 9578986-9579182 Caenorhabditis elegans
Exon101147   139   III: 9579735-9579873 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C48B4.4d.1 9570688 9579873 -1

1 Sequence

Length
5277

1 Sequence Ontology Term

Identifier Name Description
transcript