WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C48B4.4a.1 Sequence Name  C48B4.4a.1
Length (nt)  5510   Chromosome Location  III: 9570398-9580089
Chromosome . Primary Identifier  III Chromosome Location . Start  9570398
Chromosome Location . End  9580089 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48B4.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000421 ced-7 C48B4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48B4.4a C48B4.4a 5070   III: 9570688-9570882

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C48B4.4a.1 9570398 9580089 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon101077   485   III: 9570398-9570882 Caenorhabditis elegans
Exon101081   861   III: 9571423-9572283 Caenorhabditis elegans
Exon101086   255   III: 9572331-9572585 Caenorhabditis elegans
Exon101091   199   III: 9572639-9572837 Caenorhabditis elegans
Exon101096   260   III: 9572885-9573144 Caenorhabditis elegans
Exon101101   189   III: 9573224-9573412 Caenorhabditis elegans
Exon101106   179   III: 9573465-9573643 Caenorhabditis elegans
Exon101111   458   III: 9573696-9574153 Caenorhabditis elegans
Exon101116   986   III: 9575861-9576846 Caenorhabditis elegans
Exon101122   60   III: 9576974-9577033 Caenorhabditis elegans
Exon101126   970   III: 9577137-9578106 Caenorhabditis elegans
Exon101131   177   III: 9578445-9578621 Caenorhabditis elegans
Exon101136   146   III: 9578674-9578819 Caenorhabditis elegans
Exon101142   197   III: 9578986-9579182 Caenorhabditis elegans
Exon101149   88   III: 9580002-9580089 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C48B4.4a.1 9570398 9580089 -1

1 Sequence

Length
5510

1 Sequence Ontology Term

Identifier Name Description
transcript