WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54G8.5.1 Sequence Name  F54G8.5.1
Length (nt)  2594   Chromosome Location  III: 9157204-9161653
Chromosome . Primary Identifier  III Chromosome Location . Start  9157204
Chromosome Location . End  9161653 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54G8.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004223 ptr-9 F54G8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54G8.5 F54G8.5 2535   III: 9157243-9157515

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54G8.5.1 9157204 9161653 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon99879   312   III: 9157204-9157515 Caenorhabditis elegans
Exon99880   201   III: 9157564-9157764 Caenorhabditis elegans
Exon99881   388   III: 9157929-9158316 Caenorhabditis elegans
Exon99882   346   III: 9158366-9158711 Caenorhabditis elegans
Exon99883   147   III: 9158756-9158902 Caenorhabditis elegans
Exon99884   180   III: 9159310-9159489 Caenorhabditis elegans
Exon99885   323   III: 9159536-9159858 Caenorhabditis elegans
Exon99886   89   III: 9160087-9160175 Caenorhabditis elegans
Exon99887   102   III: 9160234-9160335 Caenorhabditis elegans
Exon99888   102   III: 9160380-9160481 Caenorhabditis elegans
Exon99889   266   III: 9160528-9160793 Caenorhabditis elegans
Exon99890   73   III: 9161455-9161527 Caenorhabditis elegans
Exon99891   65   III: 9161589-9161653 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54G8.5.1 9157204 9161653 -1

1 Sequence

Length
2594

1 Sequence Ontology Term

Identifier Name Description
transcript