WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54G8.4a.1 Sequence Name  F54G8.4a.1
Length (nt)  3234   Chromosome Location  III: 9147395-9153902
Chromosome . Primary Identifier  III Chromosome Location . Start  9147395
Chromosome Location . End  9153902 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54G8.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003597 nhl-1 F54G8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54G8.4a F54G8.4a 2925   III: 9147606-9147797

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54G8.4a.1 9147395 9153902 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon99844   403   III: 9147395-9147797 Caenorhabditis elegans
Exon99846   135   III: 9147844-9147978 Caenorhabditis elegans
Exon99848   126   III: 9148025-9148150 Caenorhabditis elegans
Exon99851   1330   III: 9148442-9149771 Caenorhabditis elegans
Exon99853   135   III: 9150403-9150537 Caenorhabditis elegans
Exon99855   125   III: 9150591-9150715 Caenorhabditis elegans
Exon99857   84   III: 9150767-9150850 Caenorhabditis elegans
Exon99859   160   III: 9150929-9151088 Caenorhabditis elegans
Exon99861   344   III: 9151135-9151478 Caenorhabditis elegans
Exon99863   142   III: 9151524-9151665 Caenorhabditis elegans
Exon99865   110   III: 9153220-9153329 Caenorhabditis elegans
Exon99867   140   III: 9153763-9153902 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54G8.4a.1 9147395 9153902 -1

1 Sequence

Length
3234

1 Sequence Ontology Term

Identifier Name Description
transcript