WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54F2.1.1 Sequence Name  F54F2.1.1
Length (nt)  3980   Chromosome Location  III: 8818899-8825274
Chromosome . Primary Identifier  III Chromosome Location . Start  8818899
Chromosome Location . End  8825274 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54F2.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003929 pat-2 F54F2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54F2.1 F54F2.1 3681   III: 8818902-8819074

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54F2.1.1 8818899 8825274 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon99059   176   III: 8818899-8819074 Caenorhabditis elegans
Exon99060   238   III: 8819122-8819359 Caenorhabditis elegans
Exon99061   124   III: 8819406-8819529 Caenorhabditis elegans
Exon99062   412   III: 8819847-8820258 Caenorhabditis elegans
Exon99063   230   III: 8820322-8820551 Caenorhabditis elegans
Exon99064   476   III: 8820801-8821276 Caenorhabditis elegans
Exon99065   137   III: 8821333-8821469 Caenorhabditis elegans
Exon99067   195   III: 8821694-8821888 Caenorhabditis elegans
Exon99068   712   III: 8822363-8823074 Caenorhabditis elegans
Exon99069   837   III: 8823532-8824368 Caenorhabditis elegans
Exon99070   443   III: 8824832-8825274 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54F2.1.1 8818899 8825274 1

1 Sequence

Length
3980

1 Sequence Ontology Term

Identifier Name Description
transcript