WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54F2.5.1 Sequence Name  F54F2.5.1
Length (nt)  1936   Chromosome Location  III: 8787092-8792351
Chromosome . Primary Identifier  III Chromosome Location . Start  8787092
Chromosome Location . End  8792351 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54F2.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018833 ztf-1 F54F2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54F2.5 F54F2.5 1749   III: 8787266-8787339

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54F2.5.1 8787092 8792351 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon98906   248   III: 8787092-8787339 Caenorhabditis elegans
Exon98907   105   III: 8787396-8787500 Caenorhabditis elegans
Exon98909   177   III: 8787568-8787744 Caenorhabditis elegans
Exon98910   73   III: 8788155-8788227 Caenorhabditis elegans
Exon98911   165   III: 8788995-8789159 Caenorhabditis elegans
Exon98913   191   III: 8789669-8789859 Caenorhabditis elegans
Exon98914   81   III: 8789917-8789997 Caenorhabditis elegans
Exon98915   50   III: 8790046-8790095 Caenorhabditis elegans
Exon98916   126   III: 8790569-8790694 Caenorhabditis elegans
Exon98917   92   III: 8790840-8790931 Caenorhabditis elegans
Exon98918   114   III: 8790980-8791093 Caenorhabditis elegans
Exon98919   85   III: 8791404-8791488 Caenorhabditis elegans
Exon98921   134   III: 8791538-8791671 Caenorhabditis elegans
Exon98926   295   III: 8792057-8792351 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54F2.5.1 8787092 8792351 -1

1 Sequence

Length
1936

1 Sequence Ontology Term

Identifier Name Description
transcript