WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C04D8.1g.1 Sequence Name  C04D8.1g.1
Length (nt)  4350   Chromosome Location  III: 8500126-8518878
Chromosome . Primary Identifier  III Chromosome Location . Start  8500126
Chromosome Location . End  8518878 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04D8.1g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015418 pac-1 C04D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C04D8.1g C04D8.1g 3732   III: 8500271-8500358

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C04D8.1g.1 8500126 8518878 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon98123   233   III: 8500126-8500358 Caenorhabditis elegans
Exon98128   222   III: 8502620-8502841 Caenorhabditis elegans
Exon98134   105   III: 8507630-8507734 Caenorhabditis elegans
Exon98140   221   III: 8507813-8508033 Caenorhabditis elegans
Exon98145   255   III: 8508727-8508981 Caenorhabditis elegans
Exon98150   312   III: 8509240-8509551 Caenorhabditis elegans
Exon98157   148   III: 8513203-8513350 Caenorhabditis elegans
Exon98162   88   III: 8514023-8514110 Caenorhabditis elegans
Exon98169   898   III: 8515062-8515959 Caenorhabditis elegans
Exon98175   846   III: 8516359-8517204 Caenorhabditis elegans
Exon98181   146   III: 8517320-8517465 Caenorhabditis elegans
Exon98187   211   III: 8517517-8517727 Caenorhabditis elegans
Exon98191   665   III: 8518214-8518878 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C04D8.1g.1 8500126 8518878 1

1 Sequence

Length
4350

1 Sequence Ontology Term

Identifier Name Description
transcript