WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C04D8.1a.1 Sequence Name  C04D8.1a.1
Length (nt)  5292   Chromosome Location  III: 8495110-8518879
Chromosome . Primary Identifier  III Chromosome Location . Start  8495110
Chromosome Location . End  8518879 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04D8.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015418 pac-1 C04D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C04D8.1a C04D8.1a 4818   III: 8495110-8495262

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C04D8.1a.1 8495110 8518879 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon98103   153   III: 8495110-8495262 Caenorhabditis elegans
Exon98104   148   III: 8496098-8496245 Caenorhabditis elegans
Exon98107   196   III: 8497057-8497252 Caenorhabditis elegans
Exon98110   253   III: 8497629-8497881 Caenorhabditis elegans
Exon98115   151   III: 8497935-8498085 Caenorhabditis elegans
Exon98116   187   III: 8498215-8498401 Caenorhabditis elegans
Exon98119   86   III: 8498474-8498559 Caenorhabditis elegans
Exon98125   222   III: 8502620-8502841 Caenorhabditis elegans
Exon98131   105   III: 8507630-8507734 Caenorhabditis elegans
Exon98136   221   III: 8507813-8508033 Caenorhabditis elegans
Exon98141   255   III: 8508727-8508981 Caenorhabditis elegans
Exon98146   312   III: 8509240-8509551 Caenorhabditis elegans
Exon98153   148   III: 8513203-8513350 Caenorhabditis elegans
Exon98158   88   III: 8514023-8514110 Caenorhabditis elegans
Exon98164   898   III: 8515062-8515959 Caenorhabditis elegans
Exon98170   846   III: 8516359-8517204 Caenorhabditis elegans
Exon98176   146   III: 8517320-8517465 Caenorhabditis elegans
Exon98182   211   III: 8517517-8517727 Caenorhabditis elegans
Exon98192   666   III: 8518214-8518879 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C04D8.1a.1 8495110 8518879 1

1 Sequence

Length
5292

1 Sequence Ontology Term

Identifier Name Description
transcript