WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C04D8.1f.1 Sequence Name  C04D8.1f.1
Length (nt)  5436   Chromosome Location  III: 8495008-8518916
Chromosome . Primary Identifier  III Chromosome Location . Start  8495008
Chromosome Location . End  8518916 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04D8.1f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015418 pac-1 C04D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C04D8.1f C04D8.1f 4692   III: 8495110-8495262

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C04D8.1f.1 8495008 8518916 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon98101   255   III: 8495008-8495262 Caenorhabditis elegans
Exon98106   148   III: 8496098-8496245 Caenorhabditis elegans
Exon98109   196   III: 8497057-8497252 Caenorhabditis elegans
Exon98112   253   III: 8497629-8497881 Caenorhabditis elegans
Exon98114   148   III: 8497935-8498082 Caenorhabditis elegans
Exon98118   187   III: 8498215-8498401 Caenorhabditis elegans
Exon98121   86   III: 8498474-8498559 Caenorhabditis elegans
Exon98127   222   III: 8502620-8502841 Caenorhabditis elegans
Exon98133   105   III: 8507630-8507734 Caenorhabditis elegans
Exon98139   221   III: 8507813-8508033 Caenorhabditis elegans
Exon98144   255   III: 8508727-8508981 Caenorhabditis elegans
Exon98149   312   III: 8509240-8509551 Caenorhabditis elegans
Exon98156   148   III: 8513203-8513350 Caenorhabditis elegans
Exon98161   88   III: 8514023-8514110 Caenorhabditis elegans
Exon98168   898   III: 8515062-8515959 Caenorhabditis elegans
Exon98174   846   III: 8516359-8517204 Caenorhabditis elegans
Exon98180   146   III: 8517320-8517465 Caenorhabditis elegans
Exon98186   211   III: 8517517-8517727 Caenorhabditis elegans
Exon98188   711   III: 8518206-8518916 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C04D8.1f.1 8495008 8518916 1

1 Sequence

Length
5436

1 Sequence Ontology Term

Identifier Name Description
transcript