WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F42H10.5a Sequence Name  F42H10.5a
Length (nt)  2832   Chromosome Location  III: 8472571-8472642
Chromosome . Primary Identifier  III Chromosome Location . Start  8472571
Chromosome Location . End  8472642
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42H10.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44927 MIG-39, isoform a 103.0 943 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00047148
WBRNAi00022355
WBRNAi00025483
WBRNAi00025484
WBRNAi00005590
WBRNAi00032166
WBRNAi00027338

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F42H10.5a 8472571 8472642 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018369 mig-39 F42H10.5 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F42H10.5a 8472571 8472642 1
CDS:F42H10.5a 8474320 8474855 1
CDS:F42H10.5a 8474909 8476421 1
CDS:F42H10.5a 8476468 8476887 1
CDS:F42H10.5a 8477464 8477754 1

1 Sequence

Length
2832

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F42H10.5a.1 F42H10.5a.1 3597   III: 8467035-8478394
Transcript:F42H10.5a.2 F42H10.5a.2 3774   III: 8468112-8478400
Transcript:F42H10.5a.3 F42H10.5a.3 3550   III: 8472499-8478400