WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R05D3.4a.1 Sequence Name  R05D3.4a.1
Length (nt)  2968   Chromosome Location  III: 8358625-8362549
Chromosome . Primary Identifier  III Chromosome Location . Start  8358625
Chromosome Location . End  8362549 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05D3.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007008 rfp-1 R05D3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R05D3.4a R05D3.4a 2505   III: 8358627-8358752

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R05D3.4a.1 8358625 8362549 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon97775   128   III: 8358625-8358752 Caenorhabditis elegans
Exon97776   168   III: 8358807-8358974 Caenorhabditis elegans
Exon97778   140   III: 8359024-8359163 Caenorhabditis elegans
Exon97780   484   III: 8359213-8359696 Caenorhabditis elegans
Exon97782   126   III: 8359759-8359884 Caenorhabditis elegans
Exon97784   621   III: 8359976-8360596 Caenorhabditis elegans
Exon97787   380   III: 8360734-8361113 Caenorhabditis elegans
Exon97788   381   III: 8361163-8361543 Caenorhabditis elegans
Exon97791   540   III: 8362010-8362549 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R05D3.4a.1 8358625 8362549 1

1 Sequence

Length
2968

1 Sequence Ontology Term

Identifier Name Description
transcript