WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09G8.4.1 Sequence Name  F09G8.4.1
Length (nt)  3942   Chromosome Location  III: 8258345-8265805
Chromosome . Primary Identifier  III Chromosome Location . Start  8258345
Chromosome Location . End  8265805 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09G8.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003562 ncr-2 F09G8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09G8.4 F09G8.4 3825   III: 8258345-8258495

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F09G8.4.1 8258345 8265805 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon97473   151   III: 8258345-8258495 Caenorhabditis elegans
Exon97474   491   III: 8258719-8259209 Caenorhabditis elegans
Exon97475   123   III: 8259271-8259393 Caenorhabditis elegans
Exon97476   213   III: 8259525-8259737 Caenorhabditis elegans
Exon97477   167   III: 8259786-8259952 Caenorhabditis elegans
Exon97478   82   III: 8260001-8260082 Caenorhabditis elegans
Exon97479   138   III: 8260129-8260266 Caenorhabditis elegans
Exon97480   213   III: 8260359-8260571 Caenorhabditis elegans
Exon97481   150   III: 8260618-8260767 Caenorhabditis elegans
Exon97482   191   III: 8260814-8261004 Caenorhabditis elegans
Exon97483   400   III: 8261231-8261630 Caenorhabditis elegans
Exon97484   249   III: 8261703-8261951 Caenorhabditis elegans
Exon97485   111   III: 8261994-8262104 Caenorhabditis elegans
Exon97486   184   III: 8262160-8262343 Caenorhabditis elegans
Exon97489   252   III: 8264182-8264433 Caenorhabditis elegans
Exon97490   219   III: 8264758-8264976 Caenorhabditis elegans
Exon97491   95   III: 8265104-8265198 Caenorhabditis elegans
Exon97492   114   III: 8265247-8265360 Caenorhabditis elegans
Exon97493   399   III: 8265407-8265805 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F09G8.4.1 8258345 8265805 1

1 Sequence

Length
3942

1 Sequence Ontology Term

Identifier Name Description
transcript