WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50C3.2.1 Sequence Name  C50C3.2.1
Length (nt)  6822   Chromosome Location  III: 8181881-8189372
Chromosome . Primary Identifier  III Chromosome Location . Start  8181881
Chromosome Location . End  8189372 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50C3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016800 spc-2 C50C3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50C3.2 C50C3.2 6711   III: 8181933-8181977

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C50C3.2.1 8181881 8189372 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon97257   97   III: 8181881-8181977 Caenorhabditis elegans
Exon97258   104   III: 8182032-8182135 Caenorhabditis elegans
Exon97259   214   III: 8182186-8182399 Caenorhabditis elegans
Exon97260   840   III: 8182450-8183289 Caenorhabditis elegans
Exon97261   774   III: 8183334-8184107 Caenorhabditis elegans
Exon97262   414   III: 8184156-8184569 Caenorhabditis elegans
Exon97263   307   III: 8184612-8184918 Caenorhabditis elegans
Exon97264   889   III: 8184966-8185854 Caenorhabditis elegans
Exon97265   1140   III: 8185904-8187043 Caenorhabditis elegans
Exon97266   295   III: 8187091-8187385 Caenorhabditis elegans
Exon97267   615   III: 8187432-8188046 Caenorhabditis elegans
Exon97268   717   III: 8188091-8188807 Caenorhabditis elegans
Exon97269   116   III: 8188861-8188976 Caenorhabditis elegans
Exon97270   127   III: 8189024-8189150 Caenorhabditis elegans
Exon97271   173   III: 8189200-8189372 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C50C3.2.1 8181881 8189372 1

1 Sequence

Length
6822

1 Sequence Ontology Term

Identifier Name Description
transcript