WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50C3.6.1 Sequence Name  C50C3.6.1
Length (nt)  7407   Chromosome Location  III: 8164373-8172710
Chromosome . Primary Identifier  III Chromosome Location . Start  8164373
Chromosome Location . End  8172710 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50C3.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004187 prp-8 C50C3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50C3.6 C50C3.6 6990   III: 8164377-8165206

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C50C3.6.1 8164373 8172710 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon97237   834   III: 8164373-8165206 Caenorhabditis elegans
Exon97238   238   III: 8165261-8165498 Caenorhabditis elegans
Exon97240   220   III: 8165699-8165918 Caenorhabditis elegans
Exon97241   745   III: 8165991-8166735 Caenorhabditis elegans
Exon97242   1417   III: 8166784-8168200 Caenorhabditis elegans
Exon97245   1002   III: 8168432-8169433 Caenorhabditis elegans
Exon97246   473   III: 8169486-8169958 Caenorhabditis elegans
Exon97247   1648   III: 8170065-8171712 Caenorhabditis elegans
Exon97248   360   III: 8171835-8172194 Caenorhabditis elegans
Exon97249   470   III: 8172241-8172710 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C50C3.6.1 8164373 8172710 1

1 Sequence

Length
7407

1 Sequence Ontology Term

Identifier Name Description
transcript