WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06G4.2a.1 Sequence Name  C06G4.2a.1
Length (nt)  2734   Chromosome Location  III: 7981074-7986328
Chromosome . Primary Identifier  III Chromosome Location . Start  7981074
Chromosome Location . End  7986328 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06G4.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000542 clp-1 C06G4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06G4.2a C06G4.2a 2343   III: 7981169-7981270

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06G4.2a.1 7981074 7986328 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon96747   197   III: 7981074-7981270 Caenorhabditis elegans
Exon96750   124   III: 7981365-7981488 Caenorhabditis elegans
Exon96756   138   III: 7981673-7981810 Caenorhabditis elegans
Exon96759   129   III: 7982731-7982859 Caenorhabditis elegans
Exon96765   443   III: 7982907-7983349 Caenorhabditis elegans
Exon96771   159   III: 7983392-7983550 Caenorhabditis elegans
Exon96777   263   III: 7983621-7983883 Caenorhabditis elegans
Exon96783   132   III: 7983944-7984075 Caenorhabditis elegans
Exon96789   470   III: 7984450-7984919 Caenorhabditis elegans
Exon96795   106   III: 7984964-7985069 Caenorhabditis elegans
Exon96801   58   III: 7985118-7985175 Caenorhabditis elegans
Exon96809   90   III: 7985665-7985754 Caenorhabditis elegans
Exon96815   119   III: 7985801-7985919 Caenorhabditis elegans
Exon96825   306   III: 7986023-7986328 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06G4.2a.1 7981074 7986328 1

1 Sequence

Length
2734

1 Sequence Ontology Term

Identifier Name Description
transcript