WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06G4.2a.2 Sequence Name  C06G4.2a.2
Length (nt)  2861   Chromosome Location  III: 7979959-7986380
Chromosome . Primary Identifier  III Chromosome Location . Start  7979959
Chromosome Location . End  7986380 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06G4.2a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000542 clp-1 C06G4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06G4.2a C06G4.2a 2343   III: 7981169-7981270

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06G4.2a.2 7979959 7986380 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon96743   75   III: 7979959-7980033 Caenorhabditis elegans
Exon96744   197   III: 7981074-7981270 Caenorhabditis elegans
Exon96751   124   III: 7981365-7981488 Caenorhabditis elegans
Exon96757   138   III: 7981673-7981810 Caenorhabditis elegans
Exon96760   129   III: 7982731-7982859 Caenorhabditis elegans
Exon96766   443   III: 7982907-7983349 Caenorhabditis elegans
Exon96772   159   III: 7983392-7983550 Caenorhabditis elegans
Exon96778   263   III: 7983621-7983883 Caenorhabditis elegans
Exon96784   132   III: 7983944-7984075 Caenorhabditis elegans
Exon96790   470   III: 7984450-7984919 Caenorhabditis elegans
Exon96796   106   III: 7984964-7985069 Caenorhabditis elegans
Exon96802   58   III: 7985118-7985175 Caenorhabditis elegans
Exon96810   90   III: 7985665-7985754 Caenorhabditis elegans
Exon96816   119   III: 7985801-7985919 Caenorhabditis elegans
Exon96826   358   III: 7986023-7986380 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06G4.2a.2 7979959 7986380 1

1 Sequence

Length
2861

1 Sequence Ontology Term

Identifier Name Description
transcript