WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C02C2.3.1 Sequence Name  C02C2.3.1
Length (nt)  1426   Chromosome Location  III: 7866489-7868737
Chromosome . Primary Identifier  III Chromosome Location . Start  7866489
Chromosome Location . End  7868737 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C02C2.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000845 cup-4 C02C2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C02C2.3 C02C2.3 1302   III: 7866569-7866680

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C02C2.3.1 7866489 7868737 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon96299   192   III: 7866489-7866680 Caenorhabditis elegans
Exon96300   191   III: 7866734-7866924 Caenorhabditis elegans
Exon96301   110   III: 7867237-7867346 Caenorhabditis elegans
Exon96302   245   III: 7867391-7867635 Caenorhabditis elegans
Exon96303   212   III: 7867854-7868065 Caenorhabditis elegans
Exon96304   325   III: 7868217-7868541 Caenorhabditis elegans
Exon96305   151   III: 7868587-7868737 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C02C2.3.1 7866489 7868737 1

1 Sequence

Length
1426

1 Sequence Ontology Term

Identifier Name Description
transcript