WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13A5.1e.1 Sequence Name  R13A5.1e.1
Length (nt)  2266   Chromosome Location  III: 7584683-7591581
Chromosome . Primary Identifier  III Chromosome Location . Start  7584683
Chromosome Location . End  7591581 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13A5.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000846 cup-5 R13A5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13A5.1e R13A5.1e 2007   III: 7584689-7585141

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R13A5.1e.1 7584683 7591581 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon95544   459   III: 7584683-7585141 Caenorhabditis elegans
Exon95554   184   III: 7585191-7585374 Caenorhabditis elegans
Exon95560   312   III: 7585419-7585730 Caenorhabditis elegans
Exon95561   284   III: 7586097-7586380 Caenorhabditis elegans
Exon95573   108   III: 7586662-7586769 Caenorhabditis elegans
Exon95586   228   III: 7589429-7589656 Caenorhabditis elegans
Exon95592   102   III: 7589703-7589804 Caenorhabditis elegans
Exon95595   139   III: 7590537-7590675 Caenorhabditis elegans
Exon95602   91   III: 7590991-7591081 Caenorhabditis elegans
Exon95608   359   III: 7591223-7591581 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R13A5.1e.1 7584683 7591581 1

1 Sequence

Length
2266

1 Sequence Ontology Term

Identifier Name Description
transcript