WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13A5.1c.1 Sequence Name  R13A5.1c.1
Length (nt)  2215   Chromosome Location  III: 7584181-7591573
Chromosome . Primary Identifier  III Chromosome Location . Start  7584181
Chromosome Location . End  7591573 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13A5.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000846 cup-5 R13A5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13A5.1c R13A5.1c 1890   III: 7584181-7584246

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R13A5.1c.1 7584181 7591573 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon95541   66   III: 7584181-7584246 Caenorhabditis elegans
Exon95547   453   III: 7584689-7585141 Caenorhabditis elegans
Exon95552   184   III: 7585191-7585374 Caenorhabditis elegans
Exon95558   312   III: 7585419-7585730 Caenorhabditis elegans
Exon95565   272   III: 7586109-7586380 Caenorhabditis elegans
Exon95571   108   III: 7586662-7586769 Caenorhabditis elegans
Exon95584   228   III: 7589429-7589656 Caenorhabditis elegans
Exon95590   102   III: 7589703-7589804 Caenorhabditis elegans
Exon95593   139   III: 7590537-7590675 Caenorhabditis elegans
Exon95605   351   III: 7591223-7591573 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R13A5.1c.1 7584181 7591573 1

1 Sequence

Length
2215

1 Sequence Ontology Term

Identifier Name Description
transcript