WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00197925 Gene Name  F31E3.9
Sequence Name  ? F31E3.9 Organism  Caenorhabditis elegans
Automated Description  Enriched in AFD based on RNA-seq studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 54
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00197925

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F31E3.9 F31E3.9 54   III: 6968273-6968326
 

Other

0 CDSs

0 RNAi Result

4 Allele

Public Name
gk964518
gk963887
gk964032
gk964033

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00197925 6968273 6968326 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrIII_6968327..6968869   543 III: 6968327-6968869 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in AFD neuron cells comparing to in whole animal, according to dissected single neuron RNASeq analysis. Fold change >= 4. WBPaper00050344:AFD-neuron_enriched

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00197925 6968273 6968326 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
54

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrIII_6968131..6968272   142 III: 6968131-6968272 Caenorhabditis elegans