WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28F5.3b.1 Sequence Name  F28F5.3b.1
Length (nt)  2792   Chromosome Location  III: 6807580-6815963
Chromosome . Primary Identifier  III Chromosome Location . Start  6807580
Chromosome Location . End  6815963 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28F5.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017904 lim-8 F28F5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28F5.3b F28F5.3b 2607   III: 6807580-6807837

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28F5.3b.1 6807580 6815963 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon93506   258   III: 6807580-6807837 Caenorhabditis elegans
Exon93508   172   III: 6809566-6809737 Caenorhabditis elegans
Exon93511   239   III: 6809815-6810053 Caenorhabditis elegans
Exon93514   243   III: 6810098-6810340 Caenorhabditis elegans
Exon93517   321   III: 6810665-6810985 Caenorhabditis elegans
Exon93520   124   III: 6811122-6811245 Caenorhabditis elegans
Exon93523   68   III: 6811288-6811355 Caenorhabditis elegans
Exon93526   263   III: 6811403-6811665 Caenorhabditis elegans
Exon93529   172   III: 6811712-6811883 Caenorhabditis elegans
Exon93532   87   III: 6812155-6812241 Caenorhabditis elegans
Exon93535   63   III: 6813569-6813631 Caenorhabditis elegans
Exon93540   101   III: 6815004-6815104 Caenorhabditis elegans
Exon93543   311   III: 6815151-6815461 Caenorhabditis elegans
Exon93546   87   III: 6815504-6815590 Caenorhabditis elegans
Exon93550   283   III: 6815681-6815963 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28F5.3b.1 6807580 6815963 1

1 Sequence

Length
2792

1 Sequence Ontology Term

Identifier Name Description
transcript