WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28F5.3c.1 Sequence Name  F28F5.3c.1
Length (nt)  3315   Chromosome Location  III: 6802788-6815778
Chromosome . Primary Identifier  III Chromosome Location . Start  6802788
Chromosome Location . End  6815778 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28F5.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017904 lim-8 F28F5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28F5.3c F28F5.3c 3300   III: 6802803-6802826

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F28F5.3c.1 6802788 6815778 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon93498   39   III: 6802788-6802826 Caenorhabditis elegans
Exon93499   53   III: 6803759-6803811 Caenorhabditis elegans
Exon93503   172   III: 6805692-6805863 Caenorhabditis elegans
Exon93504   159   III: 6805911-6806069 Caenorhabditis elegans
Exon93509   172   III: 6809566-6809737 Caenorhabditis elegans
Exon93512   239   III: 6809815-6810053 Caenorhabditis elegans
Exon93515   243   III: 6810098-6810340 Caenorhabditis elegans
Exon93518   321   III: 6810665-6810985 Caenorhabditis elegans
Exon93521   124   III: 6811122-6811245 Caenorhabditis elegans
Exon93524   68   III: 6811288-6811355 Caenorhabditis elegans
Exon93527   263   III: 6811403-6811665 Caenorhabditis elegans
Exon93530   172   III: 6811712-6811883 Caenorhabditis elegans
Exon93533   87   III: 6812155-6812241 Caenorhabditis elegans
Exon93536   63   III: 6813569-6813631 Caenorhabditis elegans
Exon93538   543   III: 6814175-6814717 Caenorhabditis elegans
Exon93541   101   III: 6815004-6815104 Caenorhabditis elegans
Exon93544   311   III: 6815151-6815461 Caenorhabditis elegans
Exon93547   87   III: 6815504-6815590 Caenorhabditis elegans
Exon93548   98   III: 6815681-6815778 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F28F5.3c.1 6802788 6815778 1

1 Sequence

Length
3315

1 Sequence Ontology Term

Identifier Name Description
transcript