WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C13B9.4e.1 Sequence Name  C13B9.4e.1
Length (nt)  2221   Chromosome Location  III: 6632843-6651031
Chromosome . Primary Identifier  III Chromosome Location . Start  6632843
Chromosome Location . End  6651031 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C13B9.4e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015735 pdfr-1 C13B9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C13B9.4e C13B9.4e 1551   III: 6633428-6633466

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C13B9.4e.1 6632843 6651031 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon92966   624   III: 6632843-6633466 Caenorhabditis elegans
Exon92995   99   III: 6634304-6634402 Caenorhabditis elegans
Exon93008   138   III: 6634451-6634588 Caenorhabditis elegans
Exon93021   90   III: 6634740-6634829 Caenorhabditis elegans
Exon93034   323   III: 6634877-6635199 Caenorhabditis elegans
Exon93047   157   III: 6635246-6635402 Caenorhabditis elegans
Exon93060   157   III: 6635449-6635605 Caenorhabditis elegans
Exon93073   104   III: 6636012-6636115 Caenorhabditis elegans
Exon93086   125   III: 6636893-6637017 Caenorhabditis elegans
Exon93099   123   III: 6638070-6638192 Caenorhabditis elegans
Exon93112   46   III: 6638351-6638396 Caenorhabditis elegans
Exon93125   69   III: 6638492-6638560 Caenorhabditis elegans
Exon93134   103   III: 6638744-6638846 Caenorhabditis elegans
Exon93147   63   III: 6650969-6651031 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C13B9.4e.1 6632843 6651031 -1

1 Sequence

Length
2221

1 Sequence Ontology Term

Identifier Name Description
transcript