WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C13B9.4a.2 Sequence Name  C13B9.4a.2
Length (nt)  2961   Chromosome Location  III: 6632841-6652083
Chromosome . Primary Identifier  III Chromosome Location . Start  6632841
Chromosome Location . End  6652083 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C13B9.4a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015735 pdfr-1 C13B9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C13B9.4a C13B9.4a 1641   III: 6633439-6633466

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C13B9.4a.2 6632841 6652083 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon92962   626   III: 6632841-6633466 Caenorhabditis elegans
Exon92978   71   III: 6634095-6634165 Caenorhabditis elegans
Exon92984   99   III: 6634304-6634402 Caenorhabditis elegans
Exon92997   138   III: 6634451-6634588 Caenorhabditis elegans
Exon93010   90   III: 6634740-6634829 Caenorhabditis elegans
Exon93023   323   III: 6634877-6635199 Caenorhabditis elegans
Exon93036   157   III: 6635246-6635402 Caenorhabditis elegans
Exon93049   157   III: 6635449-6635605 Caenorhabditis elegans
Exon93062   104   III: 6636012-6636115 Caenorhabditis elegans
Exon93075   155   III: 6636402-6636556 Caenorhabditis elegans
Exon93088   123   III: 6638070-6638192 Caenorhabditis elegans
Exon93101   46   III: 6638351-6638396 Caenorhabditis elegans
Exon93114   69   III: 6638492-6638560 Caenorhabditis elegans
Exon93127   103   III: 6638744-6638846 Caenorhabditis elegans
Exon93141   57   III: 6650969-6651025 Caenorhabditis elegans
Exon93148   333   III: 6651103-6651435 Caenorhabditis elegans
Exon93152   310   III: 6651774-6652083 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C13B9.4a.2 6632841 6652083 -1

1 Sequence

Length
2961

1 Sequence Ontology Term

Identifier Name Description
transcript