WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y40D12A.1.1 Sequence Name  Y40D12A.1.1
Length (nt)  2121   Chromosome Location  III: 6615414-6620051
Chromosome . Primary Identifier  III Chromosome Location . Start  6615414
Chromosome Location . End  6620051 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y40D12A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021502 cmtr-2 Y40D12A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y40D12A.1 Y40D12A.1 1908   III: 6615431-6615520

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y40D12A.1.1 6615414 6620051 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon92924   107   III: 6615414-6615520 Caenorhabditis elegans
Exon92925   96   III: 6615588-6615683 Caenorhabditis elegans
Exon92926   89   III: 6615746-6615834 Caenorhabditis elegans
Exon92927   93   III: 6615883-6615975 Caenorhabditis elegans
Exon92928   313   III: 6616021-6616333 Caenorhabditis elegans
Exon92929   213   III: 6616376-6616588 Caenorhabditis elegans
Exon92930   203   III: 6616631-6616833 Caenorhabditis elegans
Exon92931   151   III: 6616883-6617033 Caenorhabditis elegans
Exon92932   72   III: 6617081-6617152 Caenorhabditis elegans
Exon92933   96   III: 6619117-6619212 Caenorhabditis elegans
Exon92934   162   III: 6619262-6619423 Caenorhabditis elegans
Exon92935   147   III: 6619477-6619623 Caenorhabditis elegans
Exon92936   379   III: 6619673-6620051 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y40D12A.1.1 6615414 6620051 1

1 Sequence

Length
2121

1 Sequence Ontology Term

Identifier Name Description
transcript