WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y40D12A.2.1 Sequence Name  Y40D12A.2.1
Length (nt)  1647   Chromosome Location  III: 6612528-6615149
Chromosome . Primary Identifier  III Chromosome Location . Start  6612528
Chromosome Location . End  6615149 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y40D12A.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021503 ctsa-4.2 Y40D12A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y40D12A.2 Y40D12A.2 1539   III: 6612553-6612621

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y40D12A.2.1 6612528 6615149 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon92914   94   III: 6612528-6612621 Caenorhabditis elegans
Exon92915   86   III: 6612669-6612754 Caenorhabditis elegans
Exon92916   292   III: 6612971-6613262 Caenorhabditis elegans
Exon92917   120   III: 6613308-6613427 Caenorhabditis elegans
Exon92918   92   III: 6613559-6613650 Caenorhabditis elegans
Exon92919   94   III: 6613693-6613786 Caenorhabditis elegans
Exon92920   204   III: 6613835-6614038 Caenorhabditis elegans
Exon92921   122   III: 6614082-6614203 Caenorhabditis elegans
Exon92922   82   III: 6614257-6614338 Caenorhabditis elegans
Exon92923   461   III: 6614689-6615149 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y40D12A.2.1 6612528 6615149 1

1 Sequence

Length
1647

1 Sequence Ontology Term

Identifier Name Description
transcript