WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09E7.8a.1 Sequence Name  C09E7.8a.1
Length (nt)  3430   Chromosome Location  III: 6553627-6558587
Chromosome . Primary Identifier  III Chromosome Location . Start  6553627
Chromosome Location . End  6558587 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09E7.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015642 C09E7.8 C09E7.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09E7.8a C09E7.8a 3345   III: 6553700-6553789

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C09E7.8a.1 6553627 6558587 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon92770   163   III: 6553627-6553789 Caenorhabditis elegans
Exon92772   538   III: 6553838-6554375 Caenorhabditis elegans
Exon92774   234   III: 6554423-6554656 Caenorhabditis elegans
Exon92776   42   III: 6554702-6554743 Caenorhabditis elegans
Exon92778   108   III: 6554788-6554895 Caenorhabditis elegans
Exon92780   93   III: 6554942-6555034 Caenorhabditis elegans
Exon92782   168   III: 6555079-6555246 Caenorhabditis elegans
Exon92784   391   III: 6555299-6555689 Caenorhabditis elegans
Exon92786   112   III: 6555734-6555845 Caenorhabditis elegans
Exon92788   318   III: 6555893-6556210 Caenorhabditis elegans
Exon92790   210   III: 6556524-6556733 Caenorhabditis elegans
Exon92793   210   III: 6556781-6556990 Caenorhabditis elegans
Exon92794   282   III: 6557332-6557613 Caenorhabditis elegans
Exon92795   150   III: 6557660-6557809 Caenorhabditis elegans
Exon92796   105   III: 6557855-6557959 Caenorhabditis elegans
Exon92797   104   III: 6558192-6558295 Caenorhabditis elegans
Exon92798   106   III: 6558343-6558448 Caenorhabditis elegans
Exon92799   96   III: 6558492-6558587 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C09E7.8a.1 6553627 6558587 -1

1 Sequence

Length
3430

1 Sequence Ontology Term

Identifier Name Description
transcript