WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C16A3.1b.1 Sequence Name  C16A3.1b.1
Length (nt)  2234   Chromosome Location  III: 6390944-6393843
Chromosome . Primary Identifier  III Chromosome Location . Start  6390944
Chromosome Location . End  6393843 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16A3.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015806 smrc-1 C16A3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C16A3.1b C16A3.1b 2061   III: 6390949-6391038

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C16A3.1b.1 6390944 6393843 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon92215   95   III: 6390944-6391038 Caenorhabditis elegans
Exon92219   93   III: 6391407-6391499 Caenorhabditis elegans
Exon92222   144   III: 6391548-6391691 Caenorhabditis elegans
Exon92224   380   III: 6391755-6392134 Caenorhabditis elegans
Exon92227   451   III: 6392186-6392636 Caenorhabditis elegans
Exon92230   198   III: 6392683-6392880 Caenorhabditis elegans
Exon92233   501   III: 6392926-6393426 Caenorhabditis elegans
Exon92236   372   III: 6393472-6393843 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C16A3.1b.1 6390944 6393843 1

1 Sequence

Length
2234

1 Sequence Ontology Term

Identifier Name Description
transcript