WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C56G2.1a.1 Sequence Name  C56G2.1a.1
Length (nt)  3946   Chromosome Location  III: 6353384-6366663
Chromosome . Primary Identifier  III Chromosome Location . Start  6353384
Chromosome Location . End  6366663 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C56G2.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016977 akap-1 C56G2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C56G2.1a C56G2.1a 2604   III: 6353482-6353780

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C56G2.1a.1 6353384 6366663 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon92095   397   III: 6353384-6353780 Caenorhabditis elegans
Exon92098   75   III: 6354399-6354473 Caenorhabditis elegans
Exon92102   156   III: 6354801-6354956 Caenorhabditis elegans
Exon92106   73   III: 6355056-6355128 Caenorhabditis elegans
Exon92110   171   III: 6356365-6356535 Caenorhabditis elegans
Exon92114   150   III: 6357089-6357238 Caenorhabditis elegans
Exon92119   60   III: 6357523-6357582 Caenorhabditis elegans
Exon92121   113   III: 6357655-6357767 Caenorhabditis elegans
Exon92125   278   III: 6357813-6358090 Caenorhabditis elegans
Exon92129   125   III: 6358558-6358682 Caenorhabditis elegans
Exon92136   156   III: 6363686-6363841 Caenorhabditis elegans
Exon92141   84   III: 6363900-6363983 Caenorhabditis elegans
Exon92146   334   III: 6364040-6364373 Caenorhabditis elegans
Exon92151   368   III: 6364804-6365171 Caenorhabditis elegans
Exon92160   1406   III: 6365258-6366663 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C56G2.1a.1 6353384 6366663 1

1 Sequence

Length
3946

1 Sequence Ontology Term

Identifier Name Description
transcript