WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47D12.1a.1 Sequence Name  F47D12.1a.1
Length (nt)  2180   Chromosome Location  III: 6309378-6320856
Chromosome . Primary Identifier  III Chromosome Location . Start  6309378
Chromosome Location . End  6320856 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47D12.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001518 gar-2 F47D12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47D12.1a F47D12.1a 1884   III: 6309421-6309576

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F47D12.1a.1 6309378 6320856 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon91992   199   III: 6309378-6309576 Caenorhabditis elegans
Exon91995   155   III: 6314196-6314350 Caenorhabditis elegans
Exon91999   85   III: 6314399-6314483 Caenorhabditis elegans
Exon92003   222   III: 6314705-6314926 Caenorhabditis elegans
Exon92007   116   III: 6315304-6315419 Caenorhabditis elegans
Exon92012   171   III: 6317712-6317882 Caenorhabditis elegans
Exon92015   165   III: 6318141-6318305 Caenorhabditis elegans
Exon92019   292   III: 6318387-6318678 Caenorhabditis elegans
Exon92023   72   III: 6319038-6319109 Caenorhabditis elegans
Exon92027   126   III: 6319331-6319456 Caenorhabditis elegans
Exon92031   39   III: 6319568-6319606 Caenorhabditis elegans
Exon92032   538   III: 6320319-6320856 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F47D12.1a.1 6309378 6320856 1

1 Sequence

Length
2180

1 Sequence Ontology Term

Identifier Name Description
transcript