WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00255564 Gene Name  mir-8206
Sequence Name  ? C23G10.13 Organism  Caenorhabditis elegans
Automated Description  Is affected by glp-1 based on RNA-seq studies. Biotype  SO:0001265
Genetic Position  :± Length (nt)  ? 58
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00255564

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C23G10.13b C23G10.13b 21   III: 6194849-6194869
Transcript:C23G10.13a C23G10.13a 22   III: 6194885-6194906
 

Other

0 CDSs

0 RNAi Result

5 Allele

Public Name
gk964518
gk964338
gk964339
WBVar02120682
WBVar02120847

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00255564 6194849 6194906 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrIII_6194581..6194848   268 III: 6194581-6194848 Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression glp-1(e2141); TU3401 animals comparing to in TU3401 animals. Fold change > 2, FDR < 0.01. WBPaper00065993:glp-1(e2141)_upregulated
  Transcipts that showed significantly increased expression in old (days 24, 14, and 9 of adulthood) octr-1(ok371) comparing to in N2 at 25C. DESeq2 v1.31.16, fold change > 2, FDR < 0.05 WBPaper00068082:octr-1(ok371)_upregulated_old_25C

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00255564 6194849 6194906 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
58

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrIII_6194907..6195980   1074 III: 6194907-6195980 Caenorhabditis elegans