WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y42G9A.1.1 Sequence Name  Y42G9A.1.1
Length (nt)  1168   Chromosome Location  III: 6149961-6154940
Chromosome . Primary Identifier  III Chromosome Location . Start  6149961
Chromosome Location . End  6154940 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y42G9A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021531 rotr-1 Y42G9A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y42G9A.1 Y42G9A.1 906   III: 6150016-6150062

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y42G9A.1.1 6149961 6154940 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon91529   102   III: 6149961-6150062 Caenorhabditis elegans
Exon91530   40   III: 6150114-6150153 Caenorhabditis elegans
Exon91531   110   III: 6150275-6150384 Caenorhabditis elegans
Exon91533   109   III: 6153512-6153620 Caenorhabditis elegans
Exon91534   132   III: 6153686-6153817 Caenorhabditis elegans
Exon91535   189   III: 6154104-6154292 Caenorhabditis elegans
Exon91536   129   III: 6154406-6154534 Caenorhabditis elegans
Exon91537   357   III: 6154584-6154940 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y42G9A.1.1 6149961 6154940 1

1 Sequence

Length
1168

1 Sequence Ontology Term

Identifier Name Description
transcript