WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F25B5.4 Sequence Name  F25B5.4
Length (nt)  2517   Chromosome Location  III: 5940991-5941357
Chromosome . Primary Identifier  III Chromosome Location . Start  5940991
Chromosome Location . End  5941357
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25B5.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE01921 UBQ-1 94.0 838 Caenorhabditis elegans
 

Other

16 RNAi

WormBase ID
WBRNAi00066696
WBRNAi00085741
WBRNAi00000167
WBRNAi00025213
WBRNAi00045476
WBRNAi00093598
WBRNAi00076333
WBRNAi00031356
WBRNAi00002445
WBRNAi00114572
WBRNAi00095198
WBRNAi00084249
WBRNAi00114388
WBRNAi00109114
WBRNAi00114690
WBRNAi00114689

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F25B5.4 5940991 5941357 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006727 ubq-1 F25B5.4 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F25B5.4 5940991 5941357 1
CDS:F25B5.4 5941408 5941863 1
CDS:F25B5.4 5941917 5942600 1
CDS:F25B5.4 5942649 5943332 1
CDS:F25B5.4 5943383 5943708 1

1 Sequence

Length
2517

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F25B5.4.2 F25B5.4.2 2823   III: 5940254-5943841
Transcript:F25B5.4.1 F25B5.4.1 2641   III: 5940986-5943827