WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C28H8.6c.1 Sequence Name  C28H8.6c.1
Length (nt)  1192   Chromosome Location  III: 5890273-5896013
Chromosome . Primary Identifier  III Chromosome Location . Start  5890273
Chromosome Location . End  5896013 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C28H8.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016197 pxl-1 C28H8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C28H8.6c C28H8.6c 1059   III: 5890399-5890677

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C28H8.6c.1 5890273 5896013 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90438   405   III: 5890273-5890677 Caenorhabditis elegans
Exon90441   135   III: 5891324-5891458 Caenorhabditis elegans
Exon90444   96   III: 5891507-5891602 Caenorhabditis elegans
Exon90447   174   III: 5891845-5892018 Caenorhabditis elegans
Exon90450   147   III: 5892278-5892424 Caenorhabditis elegans
Exon90452   52   III: 5894079-5894130 Caenorhabditis elegans
Exon90457   130   III: 5895550-5895679 Caenorhabditis elegans
Exon90459   53   III: 5895961-5896013 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C28H8.6c.1 5890273 5896013 -1

1 Sequence

Length
1192

1 Sequence Ontology Term

Identifier Name Description
transcript