WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C28H8.6a.1 Sequence Name  C28H8.6a.1
Length (nt)  1373   Chromosome Location  III: 5890273-5896011
Chromosome . Primary Identifier  III Chromosome Location . Start  5890273
Chromosome Location . End  5896011 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C28H8.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016197 pxl-1 C28H8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C28H8.6a C28H8.6a 1242   III: 5890399-5890677

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C28H8.6a.1 5890273 5896011 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90437   405   III: 5890273-5890677 Caenorhabditis elegans
Exon90439   135   III: 5891324-5891458 Caenorhabditis elegans
Exon90442   96   III: 5891507-5891602 Caenorhabditis elegans
Exon90445   174   III: 5891845-5892018 Caenorhabditis elegans
Exon90448   147   III: 5892278-5892424 Caenorhabditis elegans
Exon90451   52   III: 5894079-5894130 Caenorhabditis elegans
Exon90454   94   III: 5895246-5895339 Caenorhabditis elegans
Exon90455   89   III: 5895386-5895474 Caenorhabditis elegans
Exon90456   130   III: 5895550-5895679 Caenorhabditis elegans
Exon90458   51   III: 5895961-5896011 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C28H8.6a.1 5890273 5896011 -1

1 Sequence

Length
1373

1 Sequence Ontology Term

Identifier Name Description
transcript