WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F01F1.1a.1 Sequence Name  F01F1.1a.1
Length (nt)  2304   Chromosome Location  III: 5879506-5882430
Chromosome . Primary Identifier  III Chromosome Location . Start  5879506
Chromosome Location . End  5882430 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F01F1.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017158 hpo-10 F01F1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F01F1.1a F01F1.1a 1941   III: 5879611-5879615

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F01F1.1a.1 5879506 5882430 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90378   110   III: 5879506-5879615 Caenorhabditis elegans
Exon90380   85   III: 5879845-5879929 Caenorhabditis elegans
Exon90386   500   III: 5879979-5880478 Caenorhabditis elegans
Exon90389   382   III: 5880548-5880929 Caenorhabditis elegans
Exon90392   132   III: 5881053-5881184 Caenorhabditis elegans
Exon90398   144   III: 5881231-5881374 Caenorhabditis elegans
Exon90402   462   III: 5881429-5881890 Caenorhabditis elegans
Exon90410   489   III: 5881942-5882430 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F01F1.1a.1 5879506 5882430 1

1 Sequence

Length
2304

1 Sequence Ontology Term

Identifier Name Description
transcript