WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R12B2.5b.1 Sequence Name  R12B2.5b.1
Length (nt)  3780   Chromosome Location  III: 5828557-5833745
Chromosome . Primary Identifier  III Chromosome Location . Start  5828557
Chromosome Location . End  5833745 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R12B2.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007016 mdt-15 R12B2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R12B2.5b R12B2.5b 2334   III: 5830222-5830320

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R12B2.5b.1 5828557 5833745 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90217   1177   III: 5828557-5829733 Caenorhabditis elegans
Exon90223   104   III: 5830217-5830320 Caenorhabditis elegans
Exon90227   318   III: 5830399-5830716 Caenorhabditis elegans
Exon90232   1155   III: 5831067-5832221 Caenorhabditis elegans
Exon90234   482   III: 5832294-5832775 Caenorhabditis elegans
Exon90242   224   III: 5832835-5833058 Caenorhabditis elegans
Exon90246   232   III: 5833282-5833513 Caenorhabditis elegans
Exon90251   88   III: 5833658-5833745 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R12B2.5b.1 5828557 5833745 -1

1 Sequence

Length
3780

1 Sequence Ontology Term

Identifier Name Description
transcript