WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R12B2.1a.1 Sequence Name  R12B2.1a.1
Length (nt)  1875   Chromosome Location  III: 5816232-5820197
Chromosome . Primary Identifier  III Chromosome Location . Start  5816232
Chromosome Location . End  5820197 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R12B2.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004858 sma-4 R12B2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R12B2.1a R12B2.1a 1698   III: 5816277-5816348

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R12B2.1a.1 5816232 5820197 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90184   117   III: 5816232-5816348 Caenorhabditis elegans
Exon90186   78   III: 5816549-5816626 Caenorhabditis elegans
Exon90188   315   III: 5816782-5817096 Caenorhabditis elegans
Exon90190   141   III: 5817672-5817812 Caenorhabditis elegans
Exon90192   105   III: 5818117-5818221 Caenorhabditis elegans
Exon90194   214   III: 5818267-5818480 Caenorhabditis elegans
Exon90196   161   III: 5818712-5818872 Caenorhabditis elegans
Exon90198   128   III: 5819005-5819132 Caenorhabditis elegans
Exon90201   166   III: 5819181-5819346 Caenorhabditis elegans
Exon90204   102   III: 5819392-5819493 Caenorhabditis elegans
Exon90207   123   III: 5819802-5819924 Caenorhabditis elegans
Exon90211   225   III: 5819973-5820197 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R12B2.1a.1 5816232 5820197 1

1 Sequence

Length
1875

1 Sequence Ontology Term

Identifier Name Description
transcript