WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0336.11a.1 Sequence Name  B0336.11a.1
Length (nt)  1740   Chromosome Location  III: 5706717-5709324
Chromosome . Primary Identifier  III Chromosome Location . Start  5706717
Chromosome Location . End  5709324 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0336.11a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015148 hpo-28 B0336.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0336.11a B0336.11a 1704   III: 5706752-5707179

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:B0336.11a.1 5706717 5709324 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89875   463   III: 5706717-5707179 Caenorhabditis elegans
Exon89877   200   III: 5707232-5707431 Caenorhabditis elegans
Exon89879   176   III: 5707477-5707652 Caenorhabditis elegans
Exon89881   159   III: 5707845-5708003 Caenorhabditis elegans
Exon89883   126   III: 5708279-5708404 Caenorhabditis elegans
Exon89884   111   III: 5708516-5708626 Caenorhabditis elegans
Exon89885   149   III: 5708672-5708820 Caenorhabditis elegans
Exon89886   84   III: 5708872-5708955 Caenorhabditis elegans
Exon89887   163   III: 5709008-5709170 Caenorhabditis elegans
Exon89888   109   III: 5709216-5709324 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:B0336.11a.1 5706717 5709324 -1

1 Sequence

Length
1740

1 Sequence Ontology Term

Identifier Name Description
transcript