WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0336.9b Sequence Name  B0336.9b
Length (nt)  1992   Chromosome Location  III: 5702343-5702513
Chromosome . Primary Identifier  III Chromosome Location . Start  5702343
Chromosome Location . End  5702513
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0336.9b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30068 SWP-1, isoform b 76.5 663 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00038954
WBRNAi00009717
WBRNAi00005261
WBRNAi00027627
WBRNAi00066603

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:B0336.9b 5702343 5702513 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006359 swp-1 B0336.9 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier 		Start End Strand
CDS:B0336.9b 5702343 5702513 -1
CDS:B0336.9b 5702576 5703109 -1
CDS:B0336.9b 5703157 5703393 -1
CDS:B0336.9b 5703440 5704431 -1
CDS:B0336.9b 5704478 5704535 -1

1 Sequence

Length
1992

1 Sequence Ontology Term

Identifier Name Description
CDS  

6 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0336.9b.4 B0336.9b.4 2890   III: 5702204-5705466
Transcript:B0336.9b.1 B0336.9b.1 2436   III: 5702206-5705464
Transcript:B0336.9b.2 B0336.9b.2 2456   III: 5702206-5705464
Transcript:B0336.9b.5 B0336.9b.5 2562   III: 5702206-5705466
Transcript:B0336.9b.6 B0336.9b.6 2975   III: 5702206-5705466
Transcript:B0336.9b.3 B0336.9b.3 2348   III: 5702254-5705464